Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015855455.1_cds_XP_016512850.1_25454
CDS Infomation

[gene=LOC107829892] [db_xref=GeneID:107829892] [protein=luminal-binding protein 5-like isoform X1] [protein_id=XP_016512850.1] [location=complement(join(18008..18494,18615..18697,18813..18967,19066..19788,19899..20113,20205..20481,21184..21247))] [gbkey=CDS]
Sequence

ATGGGTCGACGTTCAAAGGATTTCAAAAACTTGGCATTCTTGATTTTGCTTCTTTTTGTT
TCAGAGTTTTGCTTAGAAGTAACACTAGCAGCTGAGAAAAATCAGAAACAGAATCTTGGA
ACAGTGATTGGAATTGATTTAGGGACAACATATTCTTGTGTGGGTGTATACAAAGGGGAG
AATAATGTCGAGATCATAGCGAACGACCAAGGGAATCGAATCACCCCTTCATGGGTTGCA
TTCACTGATACAGAAAGATTAATTGGAGAAGCTGCAAAGAATCAAGCAGCTCTTAACCCG
GAACGTACAATATACGATGTTAAAAGGCTCATTGGAAGAAAGTTTGATGATCCAGAAGTT
CAAAAAATTATTAAGATGTTGCCTTTTGAAGTTGTGAACAAAGATGGCAAGCCTTATGTA
CAAGTAAAGATTAAAGATGGTGAGGTTAAAAAGTTTAGTCCAGAAGAAATTAGTGCTATG
ATCTTGCAGAAAATGAAGGAAACAGCTGAAGCATATTTAGGGAAGTCGATTAAACACGCT
GTCATCACCGTTCCAGCTTATTTTAATGATGCTCAAAGGCAAGCAACTAAGGATGCTGGC
GCGATAGCAGGGTTGAATGTAGTAAGGATAATAAATGAGCCTACCGCGGCTGCAATAGCT
TATGGATTGGACAAGAAAGGGAAAGAGCAGAATATATTGGTGTATGATCTTGGTGGTGGT
ACATTTGATGTTAGCATACTTAGCATTGACAATGGTGTTTTTGAGGTCCTAGCAACCAAT
GGTAACACTCACTTAGGAGGAGAGGATTTTGATCACAGACTAATGGACTATTTCATCAAG
TTGATTAAAAGGAAATATAGCAAGGATATTAGTAATGACAAGAAAGCTCTAGGAAAACTC
AGAAAGGAATGTGAGAGAGCTAAGAGGGCCTTAAGTAACCAGCACCAAGTACGCATTGAA
ATCGAGTCTCTTTTCGATGGTATTGATTTCTCTGAGCCATTAACAAGGGCAAGATTTGAG
GAATTGAACATGGATTTATTCAAGAAGACAATGAGTCCAGTCAAGAAGGCATTAGAGGAT
GCAAATTTGAAGAAGACGGATATTGATGAACTCGTGCTCGTTGGTGGGAGTACTCGAATT
CCAAAGGTGCAACAGCTATTGAAGGATTTCTTTGACGGGAAAGAACCTAACAAGGGTGTT
AATCCGGACGAAGCTGTGGCTTATGGAGCTGCAGTACAAGGAGCAATTCTTGGTGGTGAA
GGAGGGGAAGAGACCAAAGATCTTTTGTTGCTTGATGTGACTCCGTTAAGTCTGGGAATT
GAGACAGTGGGTGGGGTTATGACAAAGTTAATTCCCAGAAACAGTAGGATTCCTGTCAAG
AAAACTCAAGTTTTCACCACCTATCAAGACCAACAAACATCTGTATCAATTAAGGTATAT
GAAGGTGAAAGGAGCTTGACAAAGGATTGTCGCGAACTTGGAAGCTTTGACTTGTCTGGT
ATACCTCCTGCTCCAAGGGGAGTACCACAGATTGAGGTAAGCTTTGAGATTGATGAGAAT
GGAATTCTACAAGTGACAGCACAAGACAAAGCAGCTAAGAAGTCGAAATCCATTACCATC
ACTAGCGACAAGTCACGTCTAAGCCAGGAAGAAATTGACAGAATGTTGAAGGAGGCAGAG
GAGTTTGCAGAAGAAGATAGAAAGGTAAGGGAGAAGGTGGATTCCCGTAACAAGCTTGAA
ACGTACGTTTACAACATGAAGAACACAATCAGTGACAAGCTCGCGGAGAAGATAGATTCT
GATGACAAAGAGAAGATTGAGAGCGCTCTTAAGGAAGCTATGGACTGGATGGATGATAAC
CAAAACGCGGAGAAGGAAGACTATGATGAGAAAATGAAAGAGCTGGAAGATGTATGCAAT
CCTGTCATAAGGCAGGCCTATGAGAAGAGTAGTGGAAGTTCTGCAAATTCAGCAGATGAT
GAGGAGTCTTACGATGAATTGTAG

Peptide Sequence

PEP ID

XP_016512850.1
PEP Infomation

PREDICTED: luminal-binding protein 5-like isoform X1 [Nicotiana tabacum]
Sequence

MGRRSKDFKNLAFLILLLFVSEFCLEVTLAAEKNQKQNLGTVIGIDLGTTYSCVGVYKGE
NNVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAALNPERTIYDVKRLIGRKFDDPEV
QKIIKMLPFEVVNKDGKPYVQVKIKDGEVKKFSPEEISAMILQKMKETAEAYLGKSIKHA
VITVPAYFNDAQRQATKDAGAIAGLNVVRIINEPTAAAIAYGLDKKGKEQNILVYDLGGG
TFDVSILSIDNGVFEVLATNGNTHLGGEDFDHRLMDYFIKLIKRKYSKDISNDKKALGKL
RKECERAKRALSNQHQVRIEIESLFDGIDFSEPLTRARFEELNMDLFKKTMSPVKKALED
ANLKKTDIDELVLVGGSTRIPKVQQLLKDFFDGKEPNKGVNPDEAVAYGAAVQGAILGGE
GGEETKDLLLLDVTPLSLGIETVGGVMTKLIPRNSRIPVKKTQVFTTYQDQQTSVSIKVY
EGERSLTKDCRELGSFDLSGIPPAPRGVPQIEVSFEIDENGILQVTAQDKAAKKSKSITI
TSDKSRLSQEEIDRMLKEAEEFAEEDRKVREKVDSRNKLETYVYNMKNTISDKLAEKIDS
DDKEKIESALKEAMDWMDDNQNAEKEDYDEKMKELEDVCNPVIRQAYEKSSGSSANSADD
EESYDEL

Transcript Sequence

Gene sequence data has not been registered.